Avoid Costly Mistakes: Transfer Pricing in M&A India (2025 Guide)

Transfer Pricing in M&A

Introduction to Transfer Pricing in M&A

When companies merge or acquire others, especially in India, they face a critical tax consideration: transfer pricing (TP). If not handled correctly, TP can delay deals, attract penalties, or even lead to litigation. Whether you’re a CA student or a finance professional, understanding how TP works during mergers and acquisitions (M&A) is key to avoiding costly mistakes.

In this guide, we break it all down—using simple examples, real Indian rules, and practical steps for smooth, tax-compliant deals.

What is Transfer Pricing & Why It Matters in M&A

Transfer pricing refers to the pricing of goods, services, or intangibles exchanged between related entities within a group. In M&A, this becomes crucial when the buyer and the target company are part of the same multinational group or might become one after the deal.

Example:

Imagine Company A (India-based) acquires its related foreign company B. If Company B sells raw materials to A at inflated prices post-acquisition, profits could be shifted abroad—raising red flags for Indian tax authorities.

Risks of incorrect TP:

  • Disallowance of expenses or adjustments to income

  • Penalties under Section 271AA/271BA of the Income Tax Act

  • Delay in deal closure due to pending TP disputes

  • Post-merger audit scrutiny

Key Things to Check Before a Merger (Due Diligence)

Transfer pricing due diligence in M&A ensures the target company is compliant and free from unresolved TP risks.

Pre-merger TP checklist:

  • Has the company filed Form 3CEB for all relevant years?

  • Are TP documentation (Master File, Local File) complete and updated?

  • Are all intercompany transactions reported and justified with arm’s length pricing?

  • Any open TP audits, tax notices, or past adjustments?

  • Have comparable companies and pricing methods been selected properly?

Due diligence not only protects the buyer but also helps in proper deal valuation. For international M&A, TP due diligence becomes even more essential due to cross-border exposure.

Using APA to Avoid Future Tax Disputes

An Advance Pricing Agreement (APA) is a tool provided by Indian tax authorities to pre-decide the pricing method for intercompany transactions.

Why APA matters in M&A:

  • Locks in transfer pricing methodology for up to 5 years (plus rollback of 4 years)

  • Provides certainty, especially in cross-border mergers

  • Reduces litigation and supports smoother integration

When to apply:

If you’re acquiring a company with significant intercompany transactions or history of TP scrutiny, filing an APA before or during the deal can save major tax headaches later.

Case Example: Buying a Manufacturing Company in India

Case:
An Indian MNC planned to acquire a related-party manufacturing unit. The target company had several intercompany transactions but lacked robust documentation.

What went wrong:

  • No APA or TP documentation in place

  • Discrepancies in pricing models

  • Ongoing TP audit with proposed adjustments of ₹10 crore

How it was saved:

  • Buyer insisted on APA application as a pre-condition

  • Legal team completed due diligence and revised TP policies

  • Deal was restructured to include TP indemnities and post-merger controls

Lesson: Pre-emptive TP planning, especially using APA and documentation, can protect valuation and long-term compliance.

Easy Tips for CA Students & Finance Teams

Whether you’re prepping for a case study or handling an actual deal, here’s a practical set of takeaways:

Free TP Checklist for M&A in India:

  • Review Form 3CEB and past TP orders

  • Validate all intercompany pricing with benchmarking

  • Apply for APA if the deal includes major IP or cross-border flows

  • Align post-deal TP documentation within 90 days

  • Flag mismatched policies between the buyer and the target

Audit Red Flags:

  • Inconsistent pricing methods year-to-year

  • Missing documentation or unsigned intercompany agreements

  • Transactions with low or no margins

Conclusion

Transfer pricing can be a deal-breaker or a compliance success—depending on how you handle it during M&A. With growing global scrutiny and Indian TP audits becoming sharper, it’s essential to integrate TP into your M&A planning, execution, and post-merger compliance.

By following the right checklist, using tools like APA, and aligning documentation, both CA students and M&A teams can manage risk and deliver value—without tax surprises.

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